PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J00697.1.p
Common NameEUGRSUZ_J00697
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family SRS
Protein Properties Length: 355aa    MW: 36748.4 Da    PI: 8.0208
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J00697.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702216.27.4e-671403013154
            DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssa 94 
                       s ta+CqdCGnqakkdC+++RCRtCCksrgfdCathvkstWvpa++rrerq +++++++  +  + +++ +k++r    ++++++s+t++s++
  Eucgr.J00697.1.p 140 SSTATCQDCGNQAKKDCSYRRCRTCCKSRGFDCATHVKSTWVPASRRRERQLMTSTTTAGGTGGSvSTSGAKKPRLV-GSQTTTTSHTSTSNT 231
                       67899*********************************************999998888777666377777888865.88999999******* PP

            DUF702  95 eskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                       +++++++tss          lP +v+++avf+cvrv+svd++e+e+aYq++v+igGhvfkG+Lyd+G+ee
  Eucgr.J00697.1.p 232 TPPRSFDTSSsrqdasfkesLPGQVRAPAVFKCVRVTSVDEEEDEYAYQAVVKIGGHVFKGFLYDRGVEE 301
                       ********999********************************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051421.8E-61142300IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016234.6E-27144186IPR006510Zinc finger, lateral root primordium type 1
TIGRFAMsTIGR016249.8E-28252299IPR006511Lateral Root Primordium type 1, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0048364Biological Processroot development
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MGMVGLRDVF VVAPATSFHH PTSHHHHHHH HHNDQVIADS SNGSNNSAAT ALGMGVGVGV  60
IPLLTAGPCL GPPQNAAEGD NGNLTARGGG RAGAAAEFQL WQNQQSSHHY LKKSAPILDH  120
GNSGALIQSG GGGGIGASSS STATCQDCGN QAKKDCSYRR CRTCCKSRGF DCATHVKSTW  180
VPASRRRERQ LMTSTTTAGG TGGSVSTSGA KKPRLVGSQT TTTSHTSTSN TTPPRSFDTS  240
SSRQDASFKE SLPGQVRAPA VFKCVRVTSV DEEEDEYAYQ AVVKIGGHVF KGFLYDRGVE  300
EREDIMNLSD LHLGGGGGGD RNGASSSSPI MDPSDVYASG GGLLGGSSYG NPIN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J00697.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010034259.10.0PREDICTED: protein LATERAL ROOT PRIMORDIUM 1
SwissprotQ94CK93e-95LRP1_ARATH; Protein LATERAL ROOT PRIMORDIUM 1
TrEMBLA0A059AB820.0A0A059AB82_EUCGR; Uncharacterized protein
STRINGVIT_06s0009g03450.t011e-124(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58832646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.21e-79Lateral root primordium (LRP) protein-related